PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_19005-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 238aa    MW: 25829.5 Da    PI: 8.2216
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_19005-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.3e-08172199229
                      HHHHHHHHHHHHHHHHHHHHHHHCTSCC CS
              HLH   2 rrahnerErrRRdriNsafeeLrellPk 29 
                      ++ah  +Er+RR+++N+ +  Lr+l+P 
  TRIUR3_19005-P1 172 KTAHITVERNRRKQMNEHLTVLRSLMPC 199
                      689************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.051170227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.89E-7170201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.19E-6172204No hitNo description
Gene3DG3DSA:4.10.280.102.6E-7172200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.0E-6172199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MAEVLLVGAS LTAVQLLRYL CHPDSSHDHH PSKRPISLCL KEAKLSSQDL PLAHNILPCT  60
TQPAATKHKL VRVMGDALCD QLLVDVDGEF QLPTDAEDLF SILETWEDCV NGAAAALSPT  120
AGASSRGGLL GGSAPGNKSS KRRARQDECD GIAQAQKRQK CSPEEGGGAA PKTAHITVER  180
NRRKQMNEHL TVLRSLMPCF YVKRVLYYRY SARLSLIDSD INLHGSSSLG IGIQSYVK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003560684.18e-53PREDICTED: transcription factor SPEECHLESS-like
TrEMBLM7YNX11e-177M7YNX1_TRIUA; Transcription factor SPEECHLESS
STRINGMLOC_54435.12e-73(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34843577
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.11e-15bHLH family protein